BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E09LP1|AL428565
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig868 1391 0.0
>3x_Contig868
Length = 3693
Score = 1391 bits (701), Expect = 0.0
Identities = 701/701 (100%)
Strand = Plus / Plus
Query: 1 gatcatctgtttttgttttctggctaaaattcggttgcattctcaatggttatgtctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2993 gatcatctgtttttgttttctggctaaaattcggttgcattctcaatggttatgtctctt 3052
Query: 61 gcatactgagaacctcctctagtgtccttcgcagctgcagtatcttcttcggcgtcacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3053 gcatactgagaacctcctctagtgtccttcgcagctgcagtatcttcttcggcgtcacct 3112
Query: 121 ttgtcctccgcatcgcgaggaacgtgattgagttgaacgcttggggcatatttagtatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3113 ttgtcctccgcatcgcgaggaacgtgattgagttgaacgcttggggcatatttagtatgc 3172
Query: 181 tctagattgctgaaaatattaagtagcactttatccaaatactccggtgtattgacgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3173 tctagattgctgaaaatattaagtagcactttatccaaatactccggtgtattgacgtta 3232
Query: 241 tacatattagatggtctgacatccaatttgtaatcagggccataatattcgtagtaatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3233 tacatattagatggtctgacatccaatttgtaatcagggccataatattcgtagtaatcg 3292
Query: 301 ttgtaaggaagttcttcatccaaaatcacattattcagaatacccgtttcgaaagcccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3293 ttgtaaggaagttcttcatccaaaatcacattattcagaatacccgtttcgaaagcccat 3352
Query: 361 gtacgagccacgtttcgcattgtataaccaccaccaccaacaatcatgagaggaacaccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3353 gtacgagccacgtttcgcattgtataaccaccaccaccaacaatcatgagaggaacaccg 3412
Query: 421 aacgatttcatgtagttgacacagtttgcgtgacccttcattgaaaggttgaaacaacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3413 aacgatttcatgtagttgacacagtttgcgtgacccttcattgaaaggttgaaacaacct 3472
Query: 481 aaacgatcgccggataaagagtcaccaccgcattggagtaccacggcagaaggttggtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3473 aaacgatcgccggataaagagtcaccaccgcattggagtaccacggcagaaggttggtac 3532
Query: 541 cattccataattttacctatgactggttcaaataccgatttgtaagtggcatcgtcaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3533 cattccataattttacctatgactggttcaaataccgatttgtaagtggcatcgtcaata 3592
Query: 601 ccgtcccttaatgggacattcacagcatagtatttacctttcccgacaccagtatctctc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3593 ccgtcccttaatgggacattcacagcatagtatttacctttcccgacaccagtatctctc 3652
Query: 661 aattcaccagtacctgggaagaattccccatatttatggaa 701
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 3653 aattcaccagtacctgggaagaattccccatatttatggaa 3693
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5816
Number of Sequences: 1807
Number of extensions: 5816
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)